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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs13427483 chr2:239588809 A/G MYEOV2 chr2:241065980-241076224:- 0.51 6.59 1.48E-10 Box Plot
BLCA rs13427483 chr2:239588809 A/G NCL chr2:232318242-232348352:- 0.48 6.71 7.18E-11 Box Plot
BLCA rs13427483 chr2:239588809 A/G PPP1R7 chr2:242088991-242123067:+ 0.59 6.81 3.89E-11 Box Plot
BLCA rs13427483 chr2:239588809 A/G PSMD1 chr2:231921578-232037541:+ 0.45 5.99 4.92E-9 Box Plot
BLCA rs13427483 chr2:239588809 A/G RNF25 chr2:219528587-219537134:- 0.55 6.55 1.87E-10 Box Plot
BLCA rs13427483 chr2:239588809 A/G SEPT2 chr2:242254515-242293442:+ 0.62 6.41 4.32E-10 Box Plot
BLCA rs13427483 chr2:239588809 A/G STK16 chr2:220110177-220115059:+ 0.54 6.04 3.67E-9 Box Plot
BLCA rs13427483 chr2:239588809 A/G STK25 chr2:242432089-242449145:- 0.55 6.03 3.86E-9 Box Plot
BLCA rs13427483 chr2:239588809 A/G THAP4 chr2:242523820-242576864:- 0.53 6.43 3.9E-10 Box Plot
BLCA rs13427483 chr2:239588809 A/G TRIP12 chr2:230628554-230787955:- 0.53 6.83 3.36E-11 Box Plot
BLCA rs13427483 chr2:239588809 A/G XRCC5 chr2:216972187-217071026:+ 0.64 6.8 4.03E-11 Box Plot
BLCA rs13427483 chr2:239588809 A/G ZNF142 chr2:219502639-219524378:- 0.61 6.34 6.48E-10 Box Plot
BLCA rs13431103 chr2:237660959 A/G CAPN10 chr2:241526133-241557122:+ 0.8 7.38 1.01E-12 Box Plot
BLCA rs13431103 chr2:237660959 A/G DTYMK chr2:242615157-242626406:- 0.73 6.68 8.33E-11 Box Plot
BLCA rs13431103 chr2:237660959 A/G PPP1R7 chr2:242088991-242123067:+ 0.72 6.07 3.15E-9 Box Plot